BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C01LP1|AL426170
(808 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1735 1575 0.0
>3x_Contig1735
Length = 19486
Score = 1575 bits (793), Expect = 0.0
Identities = 804/808 (99%), Gaps = 1/808 (0%)
Strand = Plus / Plus
Query: 1 gatctccatctaccaagggtagcttgttacccattctaactgagagaatgacttttacgg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 8872 gatctccatctaccaagggtagcttgt-acccattctaactgagagaatgacttttacgg 8930
Query: 61 acttcaacaacgtgattatcacgtgacacattattcttctcctcaaacacgtgtggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8931 acttcaacaacgtgattatcacgtgacacattattcttctcctcaaacacgtgtggaaag 8990
Query: 121 ttttgtactagaaaatttgacattttgaccggttctttgaaaataagaaatgttagatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8991 ttttgtactagaaaatttgacattttgaccggttctttgaaaataagaaatgttagatga 9050
Query: 181 gatgagatataatgatggaaaggttggtgtaaagaagagtacatctttaccatcttagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9051 gatgagatataatgatggaaaggttggtgtaaagaagagtacatctttaccatcttagaa 9110
Query: 241 acgcattcacggaatagtttggcgttagaagaaatacataattcttcaaacatttaacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9111 acgcattcacggaatagtttggcgttagaagaaatacataattcttcaaacatttaacca 9170
Query: 301 tatgaagtgtgtnatagtcaagatttagctgtcacccttctttgctgttttagttgtgac 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9171 tatgaagtgtgtgatagtcaagatttagctgtcacccttctttgctgttttagttgtgac 9230
Query: 361 gaacttagctgcctcaaaaggcccgttttgttaagcatttggcagtttcaacctaaatcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9231 gaacttagctgcctcaaaaggcccgttttgttaagcatttggcagtttcaacctaaatcg 9290
Query: 421 tttctcactatagtgatagtataacctagcctgtctatttgtaagcyaaaacgataagac 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9291 tttctcactatagtgatagtataacctagcctgtctatttgtaagctaaaacgataagac 9350
Query: 481 tcaaggttacacgattgamaagttcaacgttcccactacgaatacgttttttatttatta 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9351 tcaaggttacacgattgaaaagttcaacgttcccactacgaatacgttttttatttatta 9410
Query: 541 tactgttaagcctaacagggcaagcgtcgaaataatcagagatgtctgatgataaatcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9411 tactgttaagcctaacagggcaagcgtcgaaataatcagagatgtctgatgataaatcag 9470
Query: 601 ttgattccggagaacacgagatttctcgtactacttcagcagcacattctttggcgtcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9471 ttgattccggagaacacgagatttctcgtactacttcagcagcacattctttggcgtcat 9530
Query: 661 tgaaaactgaagagcatactaagttgtatgatcatagacagcaacatgactacgtttctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9531 tgaaaactgaagagcatactaagttgtatgatcatagacagcaacatgactacgtttctc 9590
Query: 721 ataatcctgggccggctgcaccggctgcagctgcgcgtaatcccatgcagggtccaaact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9591 ataatcctgggccggctgcaccggctgcagctgcgcgtaatcccatgcagggtccaaact 9650
Query: 781 tgggatcgtactcgaattcactaggagt 808
||||||||||||||||||||||||||||
Sbjct: 9651 tgggatcgtactcgaattcactaggagt 9678
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5958
Number of Sequences: 1807
Number of extensions: 5958
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 808
length of database: 10,358,551
effective HSP length: 16
effective length of query: 792
effective length of database: 10,329,639
effective search space: 8181074088
effective search space used: 8181074088
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)